Transcript: LINC00906:1

Basic information

LNCipedia transcript ID: LINC00906:1 
LNCipedia gene ID: LINC00906
Location (hg38): chr19:28965130-28970683
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4104 bp
Exons: 5
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT064070; FPKM1_group_14585_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.9035 non-coding 
CPAT coding probability 3.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00906:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VSTM2B-6:7
4.0 LINC00906:1
4.1 LINC00906:1
5.0 LINC00906:1
5.1 LINC00906:1
5.2 LINC00906:1