Transcript: LINC00906:10

Basic information

LNCipedia transcript ID: LINC00906:10 
HGNC Gene Symbol: LINC00906    
HGNC Full Gene Name: long intergenic non-protein coding RNA 906
Ensembl Gene ID: ENSG00000267339
Ensembl Transcript ID: ENST00000585813
Location (hg38): chr19:28968468-28970299
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 842 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT146972; ENST00000585813.1; ENST00000585813.5
Alternative gene names: ENSG00000267339.1; LINC00906; ENSG00000267339.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.9035 non-coding 
CPAT coding probability 9.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00906:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VSTM2B-6:10
4.0 LINC00906:10
4.1 LINC00906:10
5.0 LINC00906:10
5.1 LINC00906:10
5.2 LINC00906:10