Transcript: LINC00906:2

Basic information

LNCipedia transcript ID: LINC00906:2 
HGNC Gene Symbol: LINC00906    
HGNC Full Gene Name: long intergenic non-protein coding RNA 906
Ensembl Gene ID: ENSG00000267339
Ensembl Transcript ID: ENST00000589921
RefSeq ID: NR_027318
Location (hg38): chr19:28965131-28969148
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3444 bp
Exons: 2
Sources: Broad Institute; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00026752; NONHSAT064071; NR_027318; ENST00000589921.1; NR_027318.2
Alternative gene names: XLOC_013027; linc-VSTM2B-6; ENSG00000267339.1; LINC00906; ENSG00000267339.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.6052 non-coding 
CPAT coding probability 2.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00906:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-VSTM2B-6:1
3.1 lnc-VSTM2B-6:1
4.0 LINC00906:2
4.1 LINC00906:2
5.0 LINC00906:2
5.1 LINC00906:2
5.2 LINC00906:2