Transcript: LINC00906:3

Basic information

LNCipedia transcript ID: LINC00906:3 
LNCipedia gene ID: LINC00906
Location (hg38): chr19:28965141-28970270
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3566 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027507; NONHSAT064072
Alternative gene names: XLOC_013027; linc-VSTM2B-6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.9035 non-coding 
CPAT coding probability 2.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00906:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-VSTM2B-6:2
3.1 lnc-VSTM2B-6:2
4.0 LINC00906:3
4.1 LINC00906:3
5.0 LINC00906:3
5.1 LINC00906:3
5.2 LINC00906:3