Transcript: LINC00909:10

Basic information

LNCipedia transcript ID: LINC00909:10 
LNCipedia gene ID: LINC00909
Location (hg38): chr18:74591737-74598583
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4259 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000264247.1|MICT00000164137.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.673 non-coding 
CPAT coding probability 3.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00909:10 yes no no no

Available literature

  1. Liu (2017), CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells., Science


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00909:10
5.0 LINC00909:10
5.1 LINC00909:10
5.2 LINC00909:10