Transcript: LINC00909:4

Basic information

LNCipedia transcript ID: LINC00909:4 
LNCipedia gene ID: LINC00909
RefSeq ID: NR_024484
Location (hg38): chr18:74591774-74597835
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3474 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT059878; NR_024484; NR_024484.1
Alternative gene names: ; LINC00909


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.673 non-coding 
CPAT coding probability 5.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00909:4 no no no no

Available literature

  1. Liu (2017), CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells., Science


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM69C-2:6
4.0 LINC00909:4
4.1 LINC00909:4
5.0 LINC00909:4
5.1 LINC00909:4
5.2 LINC00909:4