Transcript: LINC00920:2

Basic information

LNCipedia transcript ID: LINC00920:2 
HGNC Gene Symbol: LINC00920    
HGNC Full Gene Name: long intergenic non-protein coding RNA 920
Ensembl Gene ID: ENSG00000246898
Ensembl Transcript ID: ENST00000499966
Location (hg38): chr16:66408524-66412135
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2147 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000499966; TCONS_00024251; ENST00000499966.1; CTD-2258A20.4-001; OTTHUMT00000430314.1; NONHSAT143001
Alternative gene names: ENSG00000246898; XLOC_011755; linc-BEAN1; AC132186.1; ENSG00000246898.1; CTD-2258A20.4; OTTHUMG00000175510.1; LINC00920;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.5674 non-coding 
CPAT coding probability 0.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00920:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDH5-1:1
3.1 lnc-CDH5-1:1
4.0 LINC00920:2
4.1 LINC00920:2
5.0 LINC00920:2
5.1 LINC00920:2
5.2 LINC00920:2