Transcript: LINC00922:3

Basic information

LNCipedia transcript ID: LINC00922:3 ?
HGNC Gene Symbol: LINC00922    ?
HGNC Full Gene Name: long intergenic non-protein coding RNA 922
Location (hg38): chr16:65285024-65571789
Strand: -
Class: intergenic
Transcript size: 1243 bp
Exons: 10
Sources: Biogazelle lncRNA chip; Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000502378; TCONS_00024303; ENST00000564041.1; RP11-256I9.1-003; OTTHUMT00000420602.1; NONHSAT142981; ENST00000564041.5
Alternative gene names: ENSG00000250685; XLOC_011977; linc-CDH11-7; ENSG00000261742.1; RP11-256I9.1; OTTHUMG00000172812.2; LINC00922; ENSG00000261742.5;


RNA sequence:

Structure:

Protein coding potential


Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding ?
Lee translation initiation sites 0 non-coding ?
Highest peak:0
PhyloCSF score -20.3097 non-coding ?
CPAT coding probability 2.65% non-coding ?
Bazzini small ORFs 0 non-coding ?
In stringent set: yes

Locus conservation

Locus conservation?
LINC00922:3 no yes

Available literature

No linked literature available at this time.


Other resources

LNCipedia transcript ID history

LNCipedia version Deprecated transcript ID
4.0 LINC00922:3
4.1 LINC00922:3
1.3 lnc-CDH11-2:3
3.1 lnc-CDH11-3:4