Transcript: LINC00923:5

Basic information

LNCipedia transcript ID: LINC00923:5 ?
LNCipedia gene ID: LINC00923
Location (hg38): chr15:97742616-97874429
Strand: -
Class: intergenic
Transcript size: 1345 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000503874; NR_024173; NR_024173.1
Alternative gene names: ENSG00000251209; AC024651.1; ; LINC00923


RNA sequence:

Structure:

Protein coding potential


Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding ?
Lee translation initiation sites 0 non-coding ?
Highest peak:0
PhyloCSF score 14.5215 non-coding ?
CPAT coding probability 42.15% coding ?
Bazzini small ORFs 0 non-coding ?
In stringent set: no

Locus conservation

Locus conservation?
LINC00923:5 no no

Available literature

  1. Parsa (2016), Genome-Wide Association of CKD Progression: The Chronic Renal Insufficiency Cohort Study., Journal of the American Society of Nephrology : JASN


Other resources

LNCipedia transcript ID history

LNCipedia version Deprecated transcript ID
1.3 lnc-RP11-82I10.1.1-1:2
4.0 LINC00923:5
4.1 LINC00923:5
3.1 lnc-RP11-82I10.1.1-1:2