Transcript: LINC00923:6

Basic information

LNCipedia transcript ID: LINC00923:6 ?
HGNC Gene Symbol: LINC00923    ?
HGNC Full Gene Name: long intergenic non-protein coding RNA 923
Location (hg19): chr15:98285846-98417659
Strand: -
Class: intergenic
Transcript size: 1517 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_024172
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential


Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding ?
Lee translation initiation sites 0 non-coding ?
Highest peak:0
PhyloCSF score 14.5215 non-coding ?
CPAT coding probability 22.17% non-coding ?
Bazzini small ORFs 0 non-coding ?
In stringent set: yes

Locus conservation

Locus conservation?
LINC00923:6 no no

Secondary structure information

RNAfold image: download
Randfold minimum free energy:
Randfold P-value:

Targetting miRNAs

No microRNA targets found with MirTarget2

Available literature

  1. Parsa (2016), Genome-Wide Association of CKD Progression: The Chronic Renal Insufficiency Cohort Study., Journal of the American Society of Nephrology : JASN


LNCipedia transcript ID history

LNCipedia version Deprecated transcript ID
4.0 LINC00923:6
3.1 lnc-RP11-82I10.1.1-1:3