Transcript: LINC00926:19

Basic information

LNCipedia transcript ID: LINC00926:19 
LNCipedia gene ID: LINC00926
Location (hg38): chr15:57303583-57307767
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1912 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000500191; TCONS_00023263; NONHSAT044065
Alternative gene names: ENSG00000247982; XLOC_011264; linc-CGNL1-2; AC016525.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.8063 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00926:19 no no no no

Available literature

  1. Wang (2015), Multidrug-Resistance Related Long Non-Coding RNA Expression Profile Analysis of Gastric Cancer., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TCF12-1:16
3.1 lnc-TCF12-1:16
4.0 LINC00926:19
4.1 LINC00926:19
5.0 LINC00926:19
5.1 LINC00926:19
5.2 LINC00926:19