Transcript: LINC00926:6

Basic information

LNCipedia transcript ID: LINC00926:6 
LNCipedia gene ID: LINC00926
Location (hg38): chr15:57300305-57307786
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1331 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023947; NONHSAT044056
Alternative gene names: XLOC_011264; linc-CGNL1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.8388 non-coding 
CPAT coding probability 34.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00926:6 no no no no

Available literature

  1. Wang (2015), Multidrug-Resistance Related Long Non-Coding RNA Expression Profile Analysis of Gastric Cancer., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TCF12-1:6
3.1 lnc-TCF12-1:6
4.0 LINC00926:6
4.1 LINC00926:6
5.0 LINC00926:6
5.1 LINC00926:6
5.2 LINC00926:6