Transcript: LINC00929:9

Basic information

LNCipedia transcript ID: LINC00929:9 
LNCipedia gene ID: LINC00929
Location (hg38): chr15:26125203-26139997
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1997 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023325; NONHSAT041175
Alternative gene names: XLOC_011189; linc-GABRA5-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.2434 non-coding 
CPAT coding probability 22.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00929:9 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GABRA5-2:7
3.1 lnc-GABRA5-4:7
4.0 LINC00929:9
4.1 LINC00929:9
5.0 LINC00929:9
5.1 LINC00929:9
5.2 LINC00929:9