Transcript: LINC00934:6

Basic information

LNCipedia transcript ID: LINC00934:6 
HGNC Gene Symbol: LINC00934    
HGNC Full Gene Name: long intergenic non-protein coding RNA 934
Ensembl Gene ID: ENSG00000281196
Ensembl Transcript ID: ENST00000630357
RefSeq ID: NR_024246
Location (hg38): chr12:119283825-119303380
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2291 bp
Exons: 4
Sources: Broad Institute; NONCODE v4; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00020175; NONHSAT031077; NR_024246; ENST00000630357.1; NR_024246.2
Alternative gene names: XLOC_010217; linc-TAOK3-2; ENSG00000281196.1; LINC00934


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.26 non-coding 
CPAT coding probability 7.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00934:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CIT-2:1
3.1 lnc-CIT-2:1
4.0 lnc-CIT-2:1
4.1 lnc-CIT-2:1
5.0 lnc-CIT-2:1
5.1 LINC00934:2
5.2 LINC00934:6