Transcript: LINC00937:1

Basic information

LNCipedia transcript ID: LINC00937:1 
HGNC Gene Symbol: LINC00937    
HGNC Full Gene Name: long intergenic non-protein coding RNA 937
Ensembl Gene ID: ENSG00000226091
Ensembl Transcript ID: ENST00000544461
Location (hg38): chr12:8295986-8396803
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3033 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000544461.1; RP11-90D4.2-001; OTTHUMT00000400511.1; NONHSAT026322
Alternative gene names: ENSG00000226091.2; RP11-90D4.2; OTTHUMG00000168663.1; ENSG00000226091.3; LINC00937; ENSG00000226091.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 67.7353 coding 
CPAT coding probability 89.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00937:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLEC4E-2:1
4.0 LINC00937:1
4.1 LINC00937:1
5.0 LINC00937:1
5.1 LINC00937:1
5.2 LINC00937:1