Transcript: LINC00939:2

Basic information

LNCipedia transcript ID: LINC00939:2 
LNCipedia gene ID: LINC00939
Location (hg38): chr12:125958690-125983374
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2820 bp
Exons: 6
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020225; NONHSAT031730
Alternative gene names: XLOC_010238; linc-DHX37-20;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.6569 non-coding 
CPAT coding probability 3.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00939:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DHX37-3:2
3.1 lnc-DHX37-3:3
4.0 LINC00939:2
4.1 LINC00939:2
5.0 LINC00939:2
5.1 LINC00939:2
5.2 LINC00939:2