Transcript: LINC00940:1

Basic information

LNCipedia transcript ID: LINC00940:1 
LNCipedia gene ID: LINC00940
RefSeq ID: NR_036546
Location (hg38): chr12:1929202-1936576
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2352 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT025436; NR_036546; NR_036546.1
Alternative gene names: ; LINC00940


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.7939 non-coding 
CPAT coding probability 96.62% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00940:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DCP1B-1:2
4.0 LINC00940:1
4.1 LINC00940:1
5.0 LINC00940:1
5.1 LINC00940:1
5.2 LINC00940:1