Transcript: LINC00941:11

Basic information

LNCipedia transcript ID: LINC00941:11 
LNCipedia gene ID: LINC00941
Location (hg38): chr12:30795440-30806746
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6171 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235884.2|MICT00000076229.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.9859 non-coding 
CPAT coding probability 13.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00941:11 no no no no

Available literature

  1. Yan (2017), Mesenchymal Stem Cells Promote Hepatocarcinogenesis via lncRNA-MUF Interaction with ANXA2 and miR-34a., Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00941:11
5.0 LINC00941:11
5.1 LINC00941:11
5.2 LINC00941:11