Transcript: LINC00954:1

Basic information

LNCipedia transcript ID: LINC00954:1 
LNCipedia gene ID: LINC00954
Location (hg38): chr2:19868854-19885046
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3014 bp
Exons: 10
Sources: Broad Institute
Alternative transcript names: TCONS_00002639
Alternative gene names: XLOC_001379; linc-RHOB-3; FLJ12334


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.8811 non-coding 
CPAT coding probability 4.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00954:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RHOB-2:1
3.1 lnc-RHOB-4:1
4.0 LINC00954:1
4.1 LINC00954:1
5.0 LINC00954:1
5.1 LINC00954:1
5.2 LINC00954:1