Transcript: LINC00957:2

Basic information

LNCipedia transcript ID: LINC00957:2 
LNCipedia gene ID: LINC00957
RefSeq ID: NR_072981
Location (hg38): chr7:44039049-44044296
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 748 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT120336; NR_072981; NR_072981.1
Alternative gene names: ; LINC00957


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.3502 non-coding 
CPAT coding probability 3.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00957:2 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DBNL-1:4
4.0 LINC00957:2
4.1 LINC00957:2
5.0 LINC00957:2
5.1 LINC00957:2
5.2 LINC00957:2