Transcript: LINC00957:7

Basic information

LNCipedia transcript ID: LINC00957:7 
HGNC Gene Symbol: LINC00957    
HGNC Full Gene Name: long intergenic non-protein coding RNA 957
Ensembl Gene ID: ENSG00000235314
Ensembl Transcript ID: ENST00000441052
Location (hg38): chr7:44039523-44042306
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2590 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000441052; ENST00000441052.1; AC017116.8-001; OTTHUMT00000339589.1; NONHSAT120341
Alternative gene names: ENSG00000235314; AC017116.8; ENSG00000235314.1; OTTHUMG00000155351.1; LINC00957;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 54.7355 non-coding 
CPAT coding probability 70.55% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00957:7 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DBNL-1:2
3.1 lnc-DBNL-1:2
4.0 LINC00957:7
4.1 LINC00957:7
5.0 LINC00957:7
5.1 LINC00957:7
5.2 LINC00957:7