Transcript: LINC00989:3

Basic information

LNCipedia transcript ID: LINC00989:3 
LNCipedia gene ID: LINC00989
RefSeq ID: NR_038826
Location (hg38): chr4:79492593-79576460
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2054 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT097114; NR_038826; NR_038826.1
Alternative gene names: ; LINC00989


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.9073 non-coding 
CPAT coding probability 2.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00989:3 no no no no

Available literature

  1. Ye (2015), Evaluation of four genetic variants in han chinese subjects with high myopia., J Ophthalmol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BMP2K-3:3
4.0 LINC00989:3
4.1 LINC00989:3
5.0 LINC00989:3
5.1 LINC00989:3
5.2 LINC00989:3