Transcript: LINC00999:1

Basic information

LNCipedia transcript ID: LINC00999:1 
LNCipedia gene ID: LINC00999
Location (hg38): chr10:38403189-38448772
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3930 bp
Exons: 17
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000447412.2; RP11-291L22.3-003; OTTHUMT00000047650.2; NONHSAT012821
Alternative gene names: ENSG00000225119.2; RP11-291L22.3; OTTHUMG00000017995.2; FLJ44672


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 33.9577 non-coding 
CPAT coding probability 69.09% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00999:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF37A-3:1
4.0 LINC00999:1
4.1 LINC00999:1
5.0 LINC00999:1
5.1 LINC00999:1
5.2 LINC00999:1