Transcript: LINC00999:2

Basic information

LNCipedia transcript ID: LINC00999:2 
LNCipedia gene ID: LINC00999
Location (hg38): chr10:38425819-38435763
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 529 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017816; NONHSAT012822
Alternative gene names: XLOC_008461; linc-BMS1-4; FLJ44672


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.4805 non-coding 
CPAT coding probability 1.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00999:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF37A-3:1
3.1 lnc-ZNF37A-3:2
4.0 LINC00999:2
4.1 LINC00999:2
5.0 LINC00999:2
5.1 LINC00999:2
5.2 LINC00999:2