Transcript: LINC00999:5

Basic information

LNCipedia transcript ID: LINC00999:5 
LNCipedia gene ID: LINC00999
Location (hg38): chr10:38428146-38452152
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5252 bp
Exons: 8
Sources: Broad Institute
Alternative transcript names: TCONS_00017672
Alternative gene names: XLOC_008461; linc-BMS1-4; FLJ44672


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 212.2423 coding 
CPAT coding probability 96.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00999:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF37A-3:4
3.1 lnc-ZNF37A-3:6
4.0 LINC00999:5
4.1 LINC00999:5
5.0 LINC00999:5
5.1 LINC00999:5
5.2 LINC00999:5