Transcript: LINC00999:6

Basic information

LNCipedia transcript ID: LINC00999:6 
LNCipedia gene ID: LINC00999
Location (hg38): chr10:38428146-38447892
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 992 bp
Exons: 8
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000423687.1; RP11-291L22.3-201
Alternative gene names: ENSG00000225119.2; RP11-291L22.3; OTTHUMG00000017995.2; FLJ44672


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.3002 non-coding 
CPAT coding probability 23.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00999:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF37A-3:5
4.0 LINC00999:6
4.1 LINC00999:6
5.0 LINC00999:6
5.1 LINC00999:6
5.2 LINC00999:6