Transcript: LINC01000:12

Basic information

LNCipedia transcript ID: LINC01000:12 
LNCipedia gene ID: LINC01000
Location (hg38): chr7:128653159-128653665
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 507 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT123228
Alternative gene names: FLJ45340


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 176.6334 coding 
CPAT coding probability 63.02% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01000:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM71F2-1:11
4.0 LINC01000:12
4.1 LINC01000:12
5.0 LINC01000:12
5.1 LINC01000:12
5.2 LINC01000:12