Transcript: LINC01000:7

Basic information

LNCipedia transcript ID: LINC01000:7 
HGNC Gene Symbol: LINC01000    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1000
RefSeq ID: NR_024368
Location (hg38): chr7:128641241-128660998
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 10263 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT123220; NR_024368; NR_024368.1
Alternative gene names: FLJ45340; LINC01000


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 176.6334 coding 
CPAT coding probability 99.65% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01000:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM71F2-1:6
4.0 LINC01000:7
4.1 LINC01000:7
5.0 LINC01000:7
5.1 LINC01000:7
5.2 LINC01000:7