Transcript: LINC01013:18

Basic information

LNCipedia transcript ID: LINC01013:18 
HGNC Gene Symbol: LINC01013    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1013
Ensembl Gene ID: ENSG00000228495
Ensembl Transcript ID: ENST00000436112
Location (hg38): chr6:132160764-132169361
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 512 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00011373; ENST00000436112; ENST00000436112.1; RP3-523C21.1-003; OTTHUMT00000042242.1; NONHSAT114958
Alternative gene names: XLOC_005465; linc-TAAR9-1; ENSG00000228495; RP3-523C21.1; ENSG00000228495.1; OTTHUMG00000015574.3; LINC01013;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.0557 non-coding 
CPAT coding probability 4.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01013:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ENPP1-3:15
3.1 lnc-ENPP1-4:15
4.0 LINC01013:18
4.1 LINC01013:18
5.0 LINC01013:18
5.1 LINC01013:18
5.2 LINC01013:18