Transcript: LINC01015:5

Basic information

LNCipedia transcript ID: LINC01015:5 
HGNC Gene Symbol: LINC01015    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1015
Ensembl Gene ID: ENSG00000224582
Ensembl Transcript ID: ENST00000434657
Location (hg38): chr6:29529420-29533665
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2874 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000434657.5
Alternative gene names: ENSG00000224582.5; LINC01015;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.0755 non-coding 
CPAT coding probability 2.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01015:5 no no no no

Available literature

  1. Ha (2014), A comprehensive analysis of piRNAs from adult human testis and their relationship with genes and mobile elements., BMC Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01015:5
4.1 LINC01015:5
5.0 LINC01015:5
5.1 LINC01015:5
5.2 LINC01015:5