Transcript: LINC01020:12

Basic information

LNCipedia transcript ID: LINC01020:12 
LNCipedia gene ID: LINC01020
RefSeq ID: NR_026994
Location (hg38): chr5:5034359-5070004
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1751 bp
Exons: 7
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026994.1
Alternative gene names: LINC01020


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -64.5146 non-coding 
CPAT coding probability 29.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01020:12 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01020:12
5.1 LINC01020:12
5.2 LINC01020:12