Transcript: LINC01029:3

Basic information

LNCipedia transcript ID: LINC01029:3 
LNCipedia gene ID: LINC01029
Location (hg38): chr18:77986874-77993698
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 367 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000578833.1; RP11-671C19.1-004; OTTHUMT00000446084.1; NONHSAT060000
Alternative gene names: ENSG00000265843.1; RP11-671C19.1; OTTHUMG00000179393.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.5337 non-coding 
CPAT coding probability 3.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01029:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MBP-4:2
4.0 LINC01029:3
4.1 LINC01029:3
5.0 LINC01029:3
5.1 LINC01029:3
5.2 LINC01029:3