Transcript: LINC01029:6

Basic information

LNCipedia transcript ID: LINC01029:6 
HGNC Gene Symbol: LINC01029    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1029
Ensembl Gene ID: ENSG00000265843
Ensembl Transcript ID: ENST00000583106
Location (hg38): chr18:77971504-77982839
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1465 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000583106.1; RP11-671C19.1-001; OTTHUMT00000446082.1; NONHSAT059996
Alternative gene names: ENSG00000265843.1; RP11-671C19.1; OTTHUMG00000179393.1; ENSG00000265843.2; LINC01029;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.3075 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01029:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MBP-4:4
4.0 LINC01029:6
4.1 LINC01029:6
5.0 LINC01029:6
5.1 LINC01029:6
5.2 LINC01029:6