Transcript: LINC01029:7

Basic information

LNCipedia transcript ID: LINC01029:7 
LNCipedia gene ID: LINC01029
Location (hg38): chr18:77971299-77980526
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1237 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000505670; TCONS_00026222; NONHSAT059995
Alternative gene names: ENSG00000249424; XLOC_012897; linc-MBP-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.0895 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01029:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MBP-3:1
3.1 lnc-MBP-4:5
4.0 LINC01029:7
4.1 LINC01029:7
5.0 LINC01029:7
5.1 LINC01029:7
5.2 LINC01029:7