Transcript: LINC01036:3

Basic information

LNCipedia transcript ID: LINC01036:3 
HGNC Gene Symbol: LINC01036    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1036
Ensembl Gene ID: ENSG00000230426
Ensembl Transcript ID: ENST00000458683
Location (hg38): chr1:187092842-187360323
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 858 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000350; ENST00000458683; ENST00000458683.1; RP11-108M21.1-001; OTTHUMT00000086238.1; NONHSAT008457
Alternative gene names: XLOC_000497; linc-RGS18-11; ENSG00000236030; RP11-108M21.1; ENSG00000236030.1; OTTHUMG00000035513.1; LINC01036; ; ENSG00000230426.3; ERVMER61-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.496 non-coding 
CPAT coding probability 1.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01036:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PLA2G4A-1:1
3.1 lnc-PLA2G4A-1:1
4.0 LINC01036:3
4.1 LINC01036:3
5.0 LINC01036:3
5.1 LINC01036:3
5.2 LINC01036:3