Transcript: LINC01036:30

Basic information

LNCipedia transcript ID: LINC01036:30 
LNCipedia gene ID: LINC01036
Ensembl Gene ID: ENSG00000230426
Ensembl Transcript ID: ENST00000429725
Location (hg38): chr1:187641226-187643860
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2393 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000429725; ENST00000429725.1; ERVMER61-1-001; OTTHUMT00000086446.2; NONHSAT008466
Alternative gene names: ENSG00000230426; ERVMER61-1; ENSG00000230426.1; OTTHUMG00000035624.2; ENSG00000230426.2; ENSG00000230426.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.5657 non-coding 
CPAT coding probability 8.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01036:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PLA2G4A-3:1
3.1 lnc-PLA2G4A-3:1
4.0 lnc-PLA2G4A-3:1
4.1 lnc-PLA2G4A-3:1
5.0 lnc-PLA2G4A-3:1
5.1 LINC01036:21
5.2 LINC01036:30