Transcript: LINC01052:2

Basic information

LNCipedia transcript ID: LINC01052:2 
HGNC Gene Symbol: LINC01052    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1052
Ensembl Gene ID: ENSG00000234767
Ensembl Transcript ID: ENST00000437777
Location (hg38): chr13:65866174-65878219
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 496 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437777; ENST00000437777.1; RP11-223F20.2-001; OTTHUMT00000045206.1; NONHSAT034198
Alternative gene names: ENSG00000234767; RP11-223F20.2; ENSG00000234767.1; OTTHUMG00000017032.1; LINC01052;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.9281 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01052:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL445989.1-7:1
3.1 lnc-AL445989.1-8:1
4.0 LINC01052:2
4.1 LINC01052:2
5.0 LINC01052:2
5.1 LINC01052:2
5.2 LINC01052:2