Transcript: LINC01060:28

Basic information

LNCipedia transcript ID: LINC01060:28 
LNCipedia gene ID: LINC01060
Location (hg38): chr4:188455578-188601906
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 422 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249378.1|ENST00000503458.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -252.8362 non-coding 
CPAT coding probability 2.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01060:28 no no no no

Available literature

  1. Shi (2018), Loss of Linc01060 induces pancreatic cancer progression through vinculin-mediated focal adhesion turnover., Cancer Lett.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01060:28
5.0 LINC01060:28
5.1 LINC01060:28
5.2 LINC01060:28