Transcript: LINC01081:15

Basic information

LNCipedia transcript ID: LINC01081:15 
HGNC Gene Symbol: LINC01081    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1081
Ensembl Gene ID: ENSG00000268754
Ensembl Transcript ID: ENST00000597373
Location (hg38): chr16:86225580-86301303
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 674 bp
Exons: 6
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000597373.2
Alternative gene names: ENSG00000268754.2; LINC01081


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.1822 non-coding 
CPAT coding probability 3.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01081:15 no no no no

Available literature

  1. Szafranski (2014), Two deletions overlapping a distant FOXF1 enhancer unravel the role of lncRNA LINC01081 in etiology of alveolar capillary dysplasia with misalignment of pulmonary veins., Am. J. Med. Genet. A
  2. Szafranski (2013), Small noncoding differentially methylated copy-number variants, including lncRNA genes, cause a lethal lung developmental disorder., Genome Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01081:15
5.1 LINC01081:15
5.2 LINC01081:15