Transcript: LINC01087:3

Basic information

LNCipedia transcript ID: LINC01087:3 
LNCipedia gene ID: LINC01087
Location (hg38): chr2:131638742-131644424
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 711 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000437608; ENST00000437608.1; AC093838.7-002; OTTHUMT00000331859.1
Alternative gene names: ENSG00000224559; AC093838.7; ENSG00000224559.1; OTTHUMG00000153621.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.3729 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01087:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C2orf27A-1:2
3.1 lnc-C2orf27A-1:2
4.0 LINC01087:3
4.1 LINC01087:3
5.0 LINC01087:3
5.1 LINC01087:3
5.2 LINC01087:3