Transcript: LINC01088:29

Basic information

LNCipedia transcript ID: LINC01088:29 
LNCipedia gene ID: LINC01088
Location (hg38): chr4:78971621-79308793
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1282 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249307.1|MICT00000267000.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.963 non-coding 
CPAT coding probability 5.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01088:29 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01088:29
5.0 LINC01088:29
5.1 LINC01088:29
5.2 LINC01088:29