Transcript: LINC01088:3

Basic information

LNCipedia transcript ID: LINC01088:3 
LNCipedia gene ID: LINC01088
RefSeq ID: NR_038342
Location (hg38): chr4:78971748-79308799
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1011 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT097098; NR_038342; NR_038342.1
Alternative gene names: ; LINC01088


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.963 non-coding 
CPAT coding probability 9.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01088:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BMP2K-1:12
4.0 LINC01088:3
4.1 LINC01088:3
5.0 LINC01088:3
5.1 LINC01088:3
5.2 LINC01088:3