Transcript: LINC01088:5

Basic information

LNCipedia transcript ID: LINC01088:5 
LNCipedia gene ID: LINC01088
Location (hg38): chr4:79086090-79110093
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 255 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT097101; FPKM1_group_23566_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.4801 non-coding 
CPAT coding probability 2.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01088:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BMP2K-1:13
4.0 LINC01088:5
4.1 LINC01088:5
5.0 LINC01088:5
5.1 LINC01088:5
5.2 LINC01088:5