Transcript: LINC01088:7

Basic information

LNCipedia transcript ID: LINC01088:7 
LNCipedia gene ID: LINC01088
Location (hg38): chr4:79167814-79527816
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2206 bp
Exons: 13
Sources: Nielsen et al.,2014
Alternative transcript names: l_2674_chr4:80088967-80336103_prostate
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.3621 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01088:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BMP2K-1:15
4.0 LINC01088:7
4.1 LINC01088:7
5.0 LINC01088:7
5.1 LINC01088:7
5.2 LINC01088:7