Transcript: LINC01097:1

Basic information

LNCipedia transcript ID: LINC01097:1 
LNCipedia gene ID: LINC01097
Location (hg38): chr4:13526367-13534335
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1899 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000536697; NONHSAT095574
Alternative gene names: ENSG00000249512; AC006445.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -206.1178 non-coding 
CPAT coding probability 15.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01097:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NKX3-2-2:1
3.1 lnc-NKX3-2-2:1
4.0 LINC01097:1
4.1 LINC01097:1
5.0 LINC01097:1
5.1 LINC01097:1
5.2 LINC01097:1