Transcript: LINC01098:1

Basic information

LNCipedia transcript ID: LINC01098:1 
HGNC Gene Symbol: LINC01098    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1098
Ensembl Gene ID: ENSG00000231171
Ensembl Transcript ID: ENST00000507870
RefSeq ID: NR_028342
Location (hg38): chr4:177728757-177990750
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1034 bp
Exons: 6
Sources: Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_028342; ENST00000507870.1; NR_028342.1
Alternative gene names: ENSG00000231171.3; LINC01098;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 28.2696 non-coding 
CPAT coding probability 13.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01098:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEIL3-3:2
4.0 LINC01098:1
4.1 LINC01098:1
5.0 LINC01098:1
5.1 LINC01098:1
5.2 LINC01098:1