Transcript: LINC01102:17

Basic information

LNCipedia transcript ID: LINC01102:17 
LNCipedia gene ID: LINC01102
Location (hg38): chr2:104507198-104512761
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 928 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00003806
Alternative gene names: XLOC_001602; linc-POU3F3-5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.546 non-coding 
CPAT coding probability 10.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01102:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POU3F3-4:11
3.1 lnc-POU3F3-4:11
4.0 LINC01102:17
4.1 LINC01102:17
5.0 LINC01102:17
5.1 LINC01102:17
5.2 LINC01102:17