Transcript: LINC01105:7

Basic information

LNCipedia transcript ID: LINC01105:7 
LNCipedia gene ID: LINC01105
Location (hg38): chr2:5968522-5970480
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1959 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT068829; FPKM1_group_15105_transcript_1
Alternative gene names: FLJ30594; LOC150622


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.5245 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01105:7 no no no no

Available literature

  1. Tang (2016), MEG3, HCN3 and linc01105 influence the proliferation and apoptosis of neuroblastoma cells via the HIF-1α and p53 pathways., Sci Rep
  2. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ
  3. Cogill (2014), Co-expression Network Analysis of Human lncRNAs and Cancer Genes., Cancer Inform


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SOX11-3:14
4.0 LINC01105:7
4.1 LINC01105:7
5.0 LINC01105:7
5.1 LINC01105:7
5.2 LINC01105:7