Transcript: LINC01114:1

Basic information

LNCipedia transcript ID: LINC01114:1 
LNCipedia gene ID: LINC01114
Location (hg38): chr2:104746638-104757719
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2436 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00002760
Alternative gene names: XLOC_002240; linc-MFSD9-14; PANCAT; LOC284998


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.4642 non-coding 
CPAT coding probability 3.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01114:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TGFBRAP1-6:1
3.1 lnc-TGFBRAP1-7:1
4.0 LINC01114:1
4.1 LINC01114:1
5.0 LINC01114:1
5.1 LINC01114:1
5.2 LINC01114:1