Transcript: LINC01114:3

Basic information

LNCipedia transcript ID: LINC01114:3 
LNCipedia gene ID: LINC01114
RefSeq ID: NR_038231
Location (hg38): chr2:104746637-104757719
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2437 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT072940; NR_038231; NR_038231.1
Alternative gene names: PANCAT; LOC284998; LINC01114


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.4642 non-coding 
CPAT coding probability 3.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01114:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TGFBRAP1-7:8
4.0 LINC01114:3
4.1 LINC01114:3
5.0 LINC01114:3
5.1 LINC01114:3
5.2 LINC01114:3